onnxruntime

Use latest vcpkg commit in configuration, sync manifest with deps.txt (#23554)

### Description

`python3` dependency is removed in `onnx` port of
https://github.com/microsoft/vcpkg upstream.

* https://github.com/microsoft/vcpkg/pull/43236
*
https://github.com/microsoft/onnxruntime/pull/23285#issuecomment-2579073056
(Previous work)

Removed `nsync`, and use ONNX 1.70.0+ in vcpkg.json(manifest)

### Motivation and Context

* Help #23158
* #23456